BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014F12LP1|AL426722
(806 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig614 506 e-143
>3x_Contig614
Length = 2043
Score = 506 bits (255), Expect = e-143
Identities = 255/255 (100%)
Strand = Plus / Minus
Query: 4 catccagacggttttgatacggtctcgcctctatagccgggctctttctattctttctgt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 catccagacggttttgatacggtctcgcctctatagccgggctctttctattctttctgt 196
Query: 64 ttataattatagaataagagagagcactttggggttcgaaccagccgccgagtagtgaca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 ttataattatagaataagagagagcactttggggttcgaaccagccgccgagtagtgaca 136
Query: 124 gtttgtaagacggctactacagtttctgagttgttaagaaaaaaggggacgcagggtcaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 gtttgtaagacggctactacagtttctgagttgttaagaaaaaaggggacgcagggtcaa 76
Query: 184 ttaagctttttcagtgaatgttcttgagttattttgtacccagtgttctccgcaactgcc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 ttaagctttttcagtgaatgttcttgagttattttgtacccagtgttctccgcaactgcc 16
Query: 244 acccgttatcgccgg 258
|||||||||||||||
Sbjct: 15 acccgttatcgccgg 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,875
Number of Sequences: 1807
Number of extensions: 12875
Number of successful extensions: 262
Number of sequences better than 1.0e-20: 1
length of query: 806
length of database: 10,358,551
effective HSP length: 16
effective length of query: 790
effective length of database: 10,329,639
effective search space: 8160414810
effective search space used: 8160414810
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)